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Cytoscape installed on Athena

daemon@ATHENA.MIT.EDU (Alex T Prengel)
Tue Jan 21 17:16:12 2014

From: Alex T Prengel <alexp@MIT.EDU>
To: software-announce@mit.edu
Cc: alexp@mit.edu, cfyi@mit.edu
Date: Tue, 21 Jan 2014 17:15:55 -0500

I've installed Cytoscape on Athena. Cytoscape is a platform for
visualizing molecular interaction networks and biological pathways, and
for integrating these networks with annotations, gene expression
profiles and other state data. To run it, type:

add cytoscape
runcyto 

at the Athena prompt. There is more information at
http://ist.mit.edu/node/1408#Cytoscape; please follow the README.athena
link there for information about limitations in using Cytoscape on
Athena.

 


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