[27434] in Athena Bugs
Debathena: pymol
daemon@ATHENA.MIT.EDU (kromer@mit.edu)
Tue Mar 23 10:29:41 2010
Date: Tue, 23 Mar 2010 10:29:38 -0400 (EDT)
From: kromer@mit.edu
Message-Id: <201003231429.o2NETcdC016995@outgoing.mit.edu>
To: bugs@mit.edu
Errors-To: bugs-bounces@mit.edu
System name: m56-129-23
Type: i686
Display type: ATI Technologies Inc Mobility Radeon HD 3450
Shell: /bin/athena/tcsh (?)
Window manager: unknown
What were you trying to do?
align two structures using pymol
What's wrong:
get the error message "Match-Error: unable to open matrix file '/usr/share/pymol/pymol/matrices/BLOSUM62"
What should have happened:
Should have aligned the structures with no error
Please describe any relevant documentation references:
Alignment matrices are actually in /usr/share/pymol/matrices/ rather than in /usr/share/pymol/pymol/matrices. I can fix this problem for myself by doing sudo mkdir /usr/share/pymol/pymol; sudo ln -s /usr/share/pymol/matrices/ /usr/share/pymol/pymol/matrices, but it would be nice if it were fixed for everyone.
